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| (22 Dec. '08) Release 1 of the SBML Level 2 Version 4 specification is now available. It corrects a few issues in L2V3 and acts on decisions made by the SBML community.
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| (19 Dec.'26) The votes are in, and Frank Bergmann will be an SBML Editor starting in 2009. Congrats, Frank!
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| (13 Dec.'26) The next SBML Hackathon will be held March 26–28, 2009, at the EBI in Hinxton, UK.
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| (20 Aug.'26) LibSBML is an API library for working with SBML. New features include C# bindings and compressed file support.
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| (28 Jul. '08) KEGG2SBML converts KEGG pathway database files to SBML.
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| (27 Jun. '08) The next SBML Forum Meeting will be held in Gothenburg, Sweden, August 27–28, as a satellite workshop of ICSB 2008.
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| (26 Jun '08) The SBML project source code repository now uses SVN instead of CVS for version control.
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| (29 May '08) A security break-in on the server, followed by a disk failure, caused SBML.org to be off-line for two days while we rebuilt it.
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| (7 May '08) A greatly revised and rewritten list of FAQs and answers for SBML is now available.
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| (6 May '08) A new mailing list, libsbml-development, now exists for discussions of libSBML improvement and development.
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| (2 Mar.'08) The old sbml.org server failed, so we had to unveil this new site even though some areas are unfinished.
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| (25 Feb.'26) The latest version of LibSBML, an embeddable, portable API library for working with SBML content, is now available.
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| (8 Jan.'26) The latest version of SBMLToolbox, a package for working with SBML models in MATLAB, is now available.
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| (8 Jan.'26) The latest version of LibSBML, an embeddable, portable API library for working with SBML content, is now available.
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| (8 Jan.'08) The results are in, and our two new SBML Editors for 2008-2010 are Sven Sahle and Darren Wilkinson. Three cheers for them!
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| (7 Jan.'08) The results of the recent survey are in, and the dates of the 2008 SBML Hackathon will be April 7–8, with an optional third day on April 6, in Stellenbosh, South Africa.
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| (30 Dec. '07) You're reading this on a completely new site and server for SBML.org. It's still in development but hopefully the site will be ready for public use very soon.
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| (17 Dec. '07) LibSBML 3.0.3 is now available. LibSBML is an embeddable, portable API library for reading, writing and manipulating files and data streams containing SBML content.
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| (7 Dec. '07) MathSBML 2.7.1 is now available. MathSBML is an open-source package for working with SBML models in Mathematica.
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| (28 Nov. '07) LibSBML 3.0.2 is now available. LibSBML is an embeddable, portable API library for reading, writing and manipulating files and data streams containing SBML content.
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| (19 Oct. '07) LibSBML 3.0.1 is now available. LibSBML is an embeddable, portable API library for reading, writing and manipulating files and data streams containing SBML content.
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| (27 Sep. '07) Release 2 of the SBML Level 2 Version 3 specification is now available. It corrects typos and small errors in Release 2.
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| (31 Aug. '07) LibSBML 3.0.0 is now available. LibSBML is an embeddable, portable API library for reading, writing and manipulating files and data streams containing SBML content.
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| (22 Aug. '07) The next SBML Forum Meeting will be held in Long Beach, California, USA, October 5–6, as a satellite workshop of ICSB 2007.
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| (16 Jun. '07) Release 1 of the SBML Level 2 Version 3 specification is now available.
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| (3 Apr. '07) This year's SBML Hackathon will be held at the University of Newcastle, UK. Please join us and don't forget to register ASAP!
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| (25 Sep. '06) The final version of the SBML Level 2 Version 2 specification is now available!
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| (8 Sep. '06) Mike Hucka will be leading a tutorial on SBML this year at ICSB 2006 in Japan. The focus will be on the about-to-be-released SBML Level 2 Version 2.
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| (4 Feb. '06) The SBML Team released version 2.5.7 of MathSBML, a full-featured package for working with SBML in the Mathematica environment. The new version fixes a small bug in stoichiometry matrix calculations.
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| (13 Dec.'08) The latest update of the Systems Biology Ontology sports an updated interfaces and new vocabulary branches.
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| (13 Dec.'08) The latest BioUML has architectural improvements, parameter fitting, and new database interfaces.
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| (3 Dec.'08) BioModels Database, a free, public resource, now contains 208 curated and 85 uncurated models, totalling over 34 000 reactions.
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| (20 Nov.'08) Cain is an optimized stochastic simulator implementing many methods, including tau-leaping.
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| (3 Nov.'08) SynBioSS is a suite for generating and simulating synthetic biological networks.
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| (1 Nov.'08) GNA models and simulates qualitative genetic regulatory networks. It supports SBML.
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| (27 Oct.'08) ConsensusPathDB contains human pathways of metabolisms, signal transduction and gene regulation.
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| (18 Sep.'08) The latest stable (4.5) and beta (4.6) versions of the Virtual Cell are now available.
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| (9 Sep.'08) The new release of SBMLeditor, an XML editor for SBML files, fixes bugs and uses libSBML 3.0.2.
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| (21 Aug. '08) BioModels Database is a public resource containing published mathematical models of biological interest.
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| (20 Aug.'08) The latest COPASI adds MIRIAM support and bug fixes.
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| (19 Aug.'08) iBioSim is a tool for analyzing and designing genetic circuit models. It features virtually complete support for all of SBML L2v3.
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| (18 Aug.'08) The Systems Biology Workbench is a component-based application framework. The new release adds many exciting across-the-board feature enhancements.
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| (5 Jul.'08) SBMLeditor is an XML editor for SBML files. The new release fixes some bugs and adds updates for MIRIAM.
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| (4 Aug.'08) CellDesigner is a popular biochemical network modeling tool with a powerful graphical interface.
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| (11 Jul.'08) SYCAMORE is a web-based system providing access to software for modeling, viewing and simulating biochemical systems.
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| (6 Jun.'08) The latest version of SBToolbox adds GUIs, new optimization methods, and new sensitivity analysis methods.
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| (23 Apr.'08) The COPASI team will hold a 3-day workshop July 22–24, 2008, at the VBI in Virginia.
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| (22 Apr.'08) The application deadline for the 3-week intensive computational cell biology course at CSHL is April 30.
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| (2 Apr.'08) A new release of SBW (version 2.7.7) is available and offers many new features and improvements.
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| (25 Mar.'08) A new stable release of COPASI (version 4.3) is available and offers many new features and improvements.
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| (21 Mar.'08) The latest version of SBToolbox adds support for several SBML constructs such as delays and "fast" reactions.
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| (12 Feb.'08) The Cell Cycle Database collects genes, proteins and models of the cell cycle and provides a user-friendly web interface. It supports SBML.
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| (27 Jan.'08) PottersWheel is a multi-experiment fitting toolbox that supports SBML. The new version includes identifiability analysis.
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| (18 Jan.'08) The rewritten SBToolbox and companion add-on package (SBPD) offer powerful features for biological modeling in MATLAB.
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| (10 Jan.'08) Entelos's PhysioLab Modeler, a powerful whole-organism simulation and analysis system, now imports and exports SBML.
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| (9 Jan.'08) SIGNALIGN is a new tool for alignment and prediction of biochemical pathways. It supports input in SBML format.
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| (27 Nov. '07) BiologicalNetworks provides visualization and analysis services and an information management framework for PathSys, an integrated data resource.
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| (19 Nov. '07) Medicel is a software suite providing an integrated data model and data + method + application integration for biological research. Medicel Integrator and Medicel Pathway now support SBML.
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| (31 Oct. '07) RANGE is generator of random transcription networks and NEMO is a network motif language. The NEMO compiler can now emit SBML.
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| (25 Oct. '07) The SBW Development Team has released SBW version 2.7.6. SBW is a software communications framework allowing different tools to be networked.
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| (5 Oct. '07) The VCell project has released both a stable and a new beta release of VCell. Among the new features are improved SBML compatibility.
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| (5 Oct. '07) The COPASI project has released development version Build 23, featuring several new capabilities and improvements to SBML compatibility.
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| (30 Aug. '07) acslXtreme is a modeling, execution and analysis environment for continuous dynamic systems and processes. It now supports importing SBML models.
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| (5 Jul. '07) The new software package Genetdes automatically designs transcriptional networks with desired behaviors. It reads and writes SBML.
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| (25 Jun. '07) A new MATLAB-based toolbox for generating random models for biochemical networks, the RMBNToolbox, is now available. It supports SBML.
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| (21 May '07) COPASI version 4.1 (build 21) has been released. COPASI is a free, general simulator for systems biology with a large number of features.
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| (3 Apr. '07) VANTED is a network editing and visualization system with features for network-integrated visualization of data from experiments and simulations.
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| (29 Mar. '07) RSBML is a package that allows SBML to be imported into R either as an S4 object or a Bioconductor graph object.
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| (27 Mar. '07) Xholon is an open-source, general-purpose modeling and simulation tool. It can read models created using UML, among other things.
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| (15 Jan. '07) The MIRIAM project (Minimal Information Requested in the Annotation of Models) now has web services and other resources online.
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| (5 Jan. '07) BioModels Database is a free, public data resource containing published mathematical models of biological interest. The 7th release is now available.
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| (6 Oct. '06) BioNetGen@VCell is a new release of BioNetGen, a tool for automatically generating a reaction network from user-specified rules for biomolecular interactions on the level of protein domains.
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| (4 Oct. '06) PottersWheel 1.2 beta, a MATLAB systems biology toolbox, supports model creation, fitting data, and designing new experiments.
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| (21 Jul. '06) Cyto-Sim is a simulator for compartmental models containing membranes with peripheral and integral proteins.
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| (8 May '06) SBML-PET is a parameter estimation tool that uses SBML and can work with a variety of types of models.
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| (8 May '06) JSim is a Java-based simulation system for building and analyzing quantitative models.
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| (19 Apr. '06) WebCell is a web-based simulation environment for biochemical networks. It supports exploration and analysis of steady-state and dynamic behaviors.
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| (21 Feb. '06) COPASI is a biochemical modeling software package and successor to the popular Gepasi. It supports SBML.
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| (16 Feb. '06) SBMLmerge is a tool for assisting users in merging SBML files. It is now available for testing from the Max Planck Institute for Molecular Genetics.
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| (15 Feb. '06) The SABIO-Reaction Kinetics database from EML is a web-based system containing data about biochemical reactions. A beta test is under way now.
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| (31 Jan. '06) BioModels Database is a free, public data resource containing published mathematical models of biological interest. The 4th release is now available.
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| (20 Jan. '06) SBliD ("SBML-like Database" framework) is a generic web-based database framework whose specifications are close to SBML. It was developed by a team at CNRS and Joseph Fourier University (France).
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